Notch signaling and taxis mechanisms regulate early stage angiogenesis: A mathematical and computational model

Rocío Vega, Manuel Carretero, Rui D. M. Travasso, Luis L. Bonilla | PLOS Computational Biology, Vol. 16, No. 1 (2020), pp. e1006919

Interpreting neural decoding models using grouped model reliance

Simon Valentin, Maximilian Harkotte, Tzvetan Popov | PLOS Computational Biology, Vol. 16, No. 1 (2020), pp. e1007148

Optimizing circadian drug infusion schedules towards personalized cancer chronotherapy

Roger J. W. Hill, Pasquale F. Innominato, Francis Lévi, Annabelle Ballesta | PLOS Computational Biology, Vol. 16, No. 1 (2020), pp. e1007218

The role of actin protrusion dynamics in cell migration through a degradable viscoelastic extracellular matrix: Insights from a computational model

Tommy Heck, Diego A. Vargas, Bart Smeets, Herman Ramon, Paul Van Liedekerke, Hans Van Oosterwyck | PLOS Computational Biology, Vol. 16, No. 1 (2020), pp. e1007250

Nucleosome positioning sequence patterns as packing or regulatory

Erinija Pranckeviciene, Sergey Hosid, Nathan Liang, Ilya Ioshikhes | PLOS Computational Biology, Vol. 16, No. 1 (2020), pp. e1007365

Learning from animals: How to Navigate Complex Terrains

Henghui Zhu, Hao Liu, Armin Ataei, Yonatan Munk, Thomas Daniel, Ioannis Ch. Paschalidis | PLOS Computational Biology, Vol. 16, No. 1 (2020), pp. e1007452

Between-tumor and within-tumor heterogeneity in invasive potential

Veena Padmanaban, Yohannes Tsehay, Kevin J. Cheung, Andrew J. Ewald, Joel S. Bader | PLOS Computational Biology, Vol. 16, No. 1 (2020), pp. e1007464

Dynamic distribution decomposition for single-cell snapshot time series identifies subpopulations and trajectories during iPSC reprogramming

Jake P. Taylor-King, Asbjørn N. Riseth, Will Macnair, Manfred Claassen | PLOS Computational Biology, Vol. 16, No. 1 (2020), pp. e1007491

Limits on amplifiers of natural selection under death-Birth updating

Josef Tkadlec, Andreas Pavlogiannis, Krishnendu Chatterjee, Martin A. Nowak | PLOS Computational Biology, Vol. 16, No. 1 (2020), pp. e1007494

Bioinformatics analysis of whole slide images reveals significant neighborhood preferences of tumor cells in Hodgkin lymphoma

Jennifer Hannig, Hendrik Schäfer, Jörg Ackermann, Marie Hebel, Tim Schäfer, Claudia Döring, Sylvia Hartmann, Martin-Leo Hansmann, Ina Koch | PLOS Computational Biology, Vol. 16, No. 1 (2020), pp. e1007516

Transient amplifiers of selection and reducers of fixation for death-Birth updating on graphs

Benjamin Allen, Christine Sample, Robert Jencks, James Withers, Patricia Steinhagen, Lori Brizuela, Joshua Kolodny, Darren Parke, Gabor Lippner, Yulia A. Dementieva | PLOS Computational Biology, Vol. 16, No. 1 (2020), pp. e1007529

Eco-evolutionary agriculture: Host-pathogen dynamics in crop rotations

Maria Bargués-Ribera, Chaitanya S. Gokhale | PLOS Computational Biology, Vol. 16, No. 1 (2020), pp. e1007546

Collaboration leads to cooperation on sparse networks

Simon D. Angus, Jonathan Newton | PLOS Computational Biology, Vol. 16, No. 1 (2020), pp. e1007557

Elementary Growth Modes provide a molecular description of cellular self-fabrication

Daan H. de Groot, Josephus Hulshof, Bas Teusink, Frank J. Bruggeman, Robert Planqué | PLOS Computational Biology, Vol. 16, No. 1 (2020), pp. e1007559

Emergence and suppression of cooperation by action visibility in transparent games

Anton M. Unakafov, Thomas Schultze, Alexander Gail, Sebastian Moeller, Igor Kagan, Stephan Eule, Fred Wolf | PLOS Computational Biology, Vol. 16, No. 1 (2020), pp. e1007588

Computational optimization of associative learning experiments

Filip Melinscak, Dominik R. Bach | PLOS Computational Biology, Vol. 16, No. 1 (2020), pp. e1007593

Adaptive landscape flattening allows the design of both enzyme: Substrate binding and catalytic power

Vaitea Opuu, Giuliano Nigro, Thomas Gaillard, Emmanuelle Schmitt, Yves Mechulam, Thomas Simonson | PLOS Computational Biology, Vol. 16, No. 1 (2020), pp. e1007600

Developmental trajectory of Caenorhabditis elegans nervous system governs its structural organization

Anand Pathak, Nivedita Chatterjee, Sitabhra Sinha | PLOS Computational Biology, Vol. 16, No. 1 (2020), pp. e1007602

Learning spatiotemporal signals using a recurrent spiking network that discretizes time

Amadeus Maes, Mauricio Barahona, Claudia Clopath | PLOS Computational Biology, Vol. 16, No. 1 (2020), pp. e1007606

XPRESSyourself: Enhancing, standardizing, and automating ribosome profiling computational analyses yields improved insight into data

Jordan A. Berg, Jonathan R. Belyeu, Jeffrey T. Morgan, Yeyun Ouyang, Alex J. Bott, Aaron R. Quinlan, Jason Gertz, Jared Rutter | PLOS Computational Biology, Vol. 16, No. 1 (2020), pp. e1007625

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